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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ATP6V0E1, ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1
Sequence ID:NM_003945
Entrez Gene ID:8992
Ensembl ID:ENSG00000113732

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q35.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 172410799 - 172447334

NM_003945 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1205172410762172410966
206253172421777172421824
254383172447240172447369
384882172461401172461899

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40117211Full LengthBC119714ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1
40117212Full LengthBC119715ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003936  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003945 NP_003936 O15342 ATP_synt_H

Related Sequences

 
mRNAGenPeptSwissProt
BC119714 AAI19715 O15342
BC119715 AAI19716 O15342
AK312068 BAG35004 O15342
Y15286 CAA75571 O15342
CR456856 CAG33137 O15342
CR542131 CAG46928 O15342

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP6V0E1 NP_003936 M.musculus Atp6v0e 11974 Gene Info NP_079548 99
R.norvegicus Atp6v0e1 94170   NP_446030 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)