Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RAB40B, RAB40B, member RAS oncogene family
Sequence ID:NM_006822
Entrez Gene ID:10966
Ensembl ID:ENSG00000141542

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 80615537 - 80656576

NM_006822 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1910858061494380616009
108613088061636680616588
130913868061745580617532
138714478061886280618922
144815088062237180622431
150917768065633080656597

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4801271Full LengthBC018039RAB40B, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006813  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006822 NP_006813 Q12829 Ras
SOCS_box

Related Sequences

 
mRNAGenPeptSwissProt
U05227 AAA17031 Q12829
BC018039 AAH18039 Q12829
AB209711 BAD92948 Q59EV0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAB40B NP_006813 R.norvegicus Rab40b 303754   NP_001100546 94
M.musculus Rab40b 217371 Gene Info NP_631886 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)