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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PALMD, palmdelphin
Sequence ID:NM_017734
Entrez Gene ID:54873
Ensembl ID:ENSG00000099260

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p22-p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 100111500 - 100160096

NM_017734 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1488100111430100111917
489569100127874100127954
570694100133197100133321
695809100152231100152345
810843100152485100152518
844957100152631100152744
9582055100154330100155427
20562577100159574100160095

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4245261Full LengthBC012570palmdelphin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060204  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017734 NP_060204 Q9NP74 Paralemmin

Related Sequences

 
mRNAGenPeptSwissProt
BC012570 AAH12570 Q9NP74
AF262379 AAL33879 Q9NP74
AK000278 BAA91047 Q9NP74
AK024654 BAB14946 Q9NP74
AL390970 CAC01335 Q9NP74
AL390971 CAC01336 Q9NP74
AL390972 CAC01337 Q9NP74
AL390973 CAC01338 Q9NP74
AJ312214 CAC59692 Q9NP74

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PALMD NP_060204 M.musculus Palmd 114301 Gene Info NP_075734 81
R.norvegicus Palmd 310811   NP_001020859 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)