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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PPARGC1B, peroxisome proliferator-activated receptor gamma, coactivator 1 beta
Sequence ID:NM_001172698
NM_001172699
NM_133263
RefSeqGene ID:NG_016747
Entrez Gene ID:133522
Ensembl ID:ENSG00000155846

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
OBESITYADRB2
ADRB3
AGRP
CARTPT
ENPP1
FTO
GHRL
MC3R
MC4R
NR0B2
POMC
PPARG
PYY
SDC3
SIM1
UCP1
UCP2
UCP3
UCP3

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 149109860 - 149227125

 Exon Info From UCSC:
NM_001172698
NM_001172699
NM_133263

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9052771Full LengthBC144251peroxisome proliferator-activated receptor gamma, coactivator 1 beta
40146993Full LengthBC132971peroxisome proliferator-activated receptor gamma, coactivator 1 beta
40146995Full LengthBC132973peroxisome proliferator-activated receptor gamma, coactivator 1 beta
5104499IncompleteBC026956peroxisome proliferator-activated receptor gamma, coactivator 1 beta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_573570  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001172698 NP_001166169    
NM_001172699 NP_001166170    
NM_133263 NP_573570 Q86YN6 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
BC026956 AAH26956 Q8TAL0
BC132971 AAI32972 Q86YN6
BC132973 AAI32974 Q86YN6
BC144251 AAI44252 B7ZM40
AF468496 AAL78633 Q86YN6
AF468497 AAL78634 Q86YN6
AY188947 AAO40022 Q86YN6
AY188948 AAO40023 Q86YN6
AY188949 AAO40024 Q86YN6
AY188950 AAO40025 Q86YN6
AK095391 BAC04541 Q86YN6
AK123614 BAG53922 Q86YN6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPARGC1B NP_001166169 M.musculus Ppargc1b 170826 Gene Info NP_573512 80
R.norvegicus Ppargc1b 291567   NP_788264 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)