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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CTF1, Cardiotrophin 1
Sequence ID:NM_001330
NM_001142544
RefSeqGene ID:NG_009171
Entrez Gene ID:1489
Ensembl ID:ENSG00000150281

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 30907958 - 30914868

 Exon Info From UCSC:
NM_001330
NM_001142544

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5750481Full LengthBC064416cardiotrophin 1
5754188Full LengthBC036787cardiotrophin 1
5806399IncompleteBC049822cardiotrophin 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001142544 NP_001136016    
NM_001330 NP_001321 Q16619  

Related Sequences

 
mRNAGenPeptSwissProt
U43030 AAA85229 Q16619
BC036787 AAH36787 Q16619
BC064416 AAH64416 Q16619

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CTF1 NP_001321 R.norvegicus Ctf1 29201   NP_058825 81
M.musculus Ctf1 13019 Gene Info NP_031821 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta