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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. AFAP1L1, Actin filament associated protein 1-like 1
Sequence ID:NM_152406
NM_001146337
Entrez Gene ID:134265
Ensembl ID:ENSG00000157510

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 148651457 - 148721365

 Exon Info From UCSC:
NM_152406
NM_001146337

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40118258Full LengthBC125093actin filament associated protein 1-like 1
40118263Full LengthBC125094actin filament associated protein 1-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689619  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001146337 NP_001139809    
NM_152406 NP_689619 Q8TED9 PH

Related Sequences

 
mRNAGenPeptSwissProt
BC040723 AAH40723 Q8TED9
BC125093 AAI25094 Q8TED9
BC125094 AAI25095 Q8TED9
AK074185 BAB85011 Q8TED9
AK094067 BAC04277 Q8TED9
AK095980 BAC04664 Q8TED9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AFAP1L1 NP_689619 M.musculus Afap1l1 106877 Gene Info NP_849259 89
R.norvegicus Afap1l1 291565   NP_001099612 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)