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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SIL1, SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)
Sequence ID:NM_001037633
NM_022464
RefSeqGene ID:NG_008112
Entrez Gene ID:64374
Ensembl ID:ENSG00000120725

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
MARINESCO-SJOGREN SYNDROME 

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 138282413 - 138533983

 Exon Info From UCSC:
NM_001037633
NM_022464

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4640182Full LengthBC011568SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001037633 NP_001032722 Q9H173  
NM_022464 NP_071909 Q9H173  

Related Sequences

 
mRNAGenPeptSwissProt
BC011568 AAH11568 Q9H173
AF547994 AAN84477 Q9H173
AY358950 AAQ89309 Q9H173
DQ059315 AAY89591 A0RZB6
DQ173771 ABA60425 A0RZG6
DQ173772 ABA60426 A0RZB6
EU176671 ABW03472  
EU176328 ABW03779  
AK074624 BAC11096 Q9H173
AK075177 BAC11452 Q9H173
AJ299442 CAC17773 Q9H173

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SIL1 NP_001032722 R.norvegicus Sil1 291673   NP_955408 86
M.musculus Sil1 81500 Gene Info NP_109674 85
D.melanogaster CG10420 43034   NP_651356 32
A.gambiae AgaP_AGAP003488 1270944   XP_309679 31
A.thaliana AT3G51980 824361   NP_190766 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)