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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ETF1, Eukaryotic translation termination factor 1
Sequence ID:NM_004730
Entrez Gene ID:2107
Ensembl ID:ENSG00000120705

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 137843684 - 137877400

 Exon Info From UCSC:
NM_004730

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3677482Full LengthBC014269eukaryotic translation termination factor 1
30389626Full LengthBC088358eukaryotic translation termination factor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004721  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004730 NP_004721 P62495 eRF1_1
eRF1_2
eRF1_3

Related Sequences

 
mRNAGenPeptSwissProt
M75715 AAA36665 P62495
U90176 AAB49726 P62495
BC014269 AAH14269 Q96CG1
BC088358 AAH88358 P62495
BT007374 AAP36038 Q96CG1
DQ890706 ABM81632  
DQ893890 ABM84816  
AK312510 BAG35411 P62495
AK302364 BAH13684 B7Z7P8
X81625 CAA57281 P62495

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ETF1 NP_004721 M.musculus Etf1 225363 Gene Info NP_659115 100
R.norvegicus Etf1 307503   NP_001008345 100
A.gambiae AgaP_AGAP010310 1279737   XP_319502 86
D.melanogaster eRF1 40240   NP_788547 86
C.elegans T05H4.6 179028   NP_001024107 79
N.crassa NCU00410 3873443   XP_957296 75
A.thaliana ERF1-1 834839   NP_001032029 72
S.cerevisiae SUP45 852440   NP_009701 69
S.pombe sup45 2542148   NP_594680 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)