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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC44A3, Solute carrier family 44, member 3
Sequence ID:NM_001114106
NM_001258340
NM_152369
NM_001258341
NM_001258342
NM_001258343
Entrez Gene ID:126969
Ensembl ID:ENSG00000143036

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 95286205 - 95360585

 Exon Info From UCSC:
NM_001114106
NM_152369

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5760394Full LengthBC053877solute carrier family 44, member 3
5174513IncompleteBC033858solute carrier family 44, member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689582  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001114106 NP_001107578 Q8N4M1  
NM_001258340 NP_001245269    
NM_001258341 NP_001245270    
NM_001258342 NP_001245271    
NM_001258343 NP_001245272    
NM_152369 NP_689582   DUF580

Related Sequences

 
mRNAGenPeptSwissProt
BC033858 AAH33858 Q8N4M1
BC053877 AAH53877 Q8N4M1
AY358659 AAQ89022 Q8N4M1
HQ257925 ADR82679  
AK300193 BAG61966 B4DTF4
AK301288 BAG62846 B4DVY4
AK302381 BAG63698 B4DYD6
AK303906 BAG64836 Q8N4M1
AK316123 BAH14494 B7ZA08

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC44A3 NP_001107578 M.musculus Slc44a3 213603 Gene Info NP_663369 81
R.norvegicus Slc44a3 295417   NP_001013936 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)