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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SNX24, Sorting nexin 24
Sequence ID:NM_014035
Entrez Gene ID:28966
Ensembl ID:ENSG00000064652

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q23.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 122181270 - 122344899

NM_014035 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1229122181159122181387
230313122272428122272511
314418122281749122281853
419513122335606122335700
514546122337099122337131
547611122337634122337698
6122136122343376122344900

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3538426Full LengthBC010886sorting nexin 24
4585781Full LengthBC069012sorting nexin 24

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_054754  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014035 NP_054754 Q9Y343 PX

Related Sequences

 
mRNAGenPeptSwissProt
AF139461 AAD32668 Q9Y343
BC010886 AAH10886 Q9Y343
BC069012 AAH69012 Q9Y343
AY044655 AAK98769 Q9Y343
AY358098 AAQ88465 Q9Y343
HQ448039 ADQ32520  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SNX24 NP_054754 M.musculus Snx24 69226 Gene Info NP_083670 97
R.norvegicus Snx24 361328   NP_001008365 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)