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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RCHY1, ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
Sequence ID:NM_001008925
NM_001009922
NM_015436
NR_037913
NR_037914
RefSeqGene ID:NG_029152
Entrez Gene ID:25898
Ensembl ID:ENSG00000163743

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 76406822 - 76439503

 Exon Info From UCSC:
NM_001008925
NM_001009922
NM_015436

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5301408Full LengthBC047393ring finger and CHY zinc finger domain containing 1
3916707IncompleteBC015464ring finger and CHY zinc finger domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001008925  NP_056251  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001008925 NP_001008925   zf-C3HC4
zf-CHY
NM_001009922 NP_001009922    
NM_015436 NP_056251 Q96PM5 zf-C3HC4
zf-CHY

Related Sequences

 
mRNAGenPeptSwissProt
BC015464 AAH15464 Q96BL1
BC047393 AAH47393 Q96PM5
AF255666 AAK96896 Q96PM5
AF305424 AAL09356 Q96PM5
AF247041 AAL76101 Q96PM5
AY888047 AAX78233 Q96PM5
GQ250944 ACT35531 Q96PM5
GQ250945 ACT35532 C7E542
GQ250946 ACT35533 C7E543
GQ129342 ACT64476  
GQ129343 ACT64477  
GU937000 ADD21555 D3YRV2
HQ447979 ADQ32462  
JF691538 AEO00252 G3FDP4
JF691539 AEO00253 G3FDP5
AB209072 BAD92309 Q96PM5
AK091501 BAG52375 Q96PM5
AL050144 CAB43290 Q9Y3X7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RCHY1 NP_056251 M.musculus Rchy1 68098 Gene Info NP_080833 90
R.norvegicus Rchy1 289508   NP_001007619 90
D.melanogaster CG16947 33901   NP_609030 50
A.thaliana AT3G62970 825472   NP_191856 49
S.pombe SPAC2F3.16 2541608   NP_594394 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)