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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DEPDC1B, DEP domain containing 1B
Sequence ID:NM_001145208
NM_018369
Entrez Gene ID:55789
Ensembl ID:ENSG00000035499

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 59892741 - 59995961

 Exon Info From UCSC:
NM_001145208
NM_018369

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5091386Full LengthBC019075DEP domain containing 1B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060839  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145208 NP_001138680    
NM_018369 NP_060839 Q8WUY9 DEP

Related Sequences

 
mRNAGenPeptSwissProt
BC010904 AAH10904 Q8WUY9
BC019075 AAH19075 Q8WUY9
AF303178 AAN31126 Q8WUY9
AF488828 AAO49477 Q8WUY9
AF490257 AAO85465 Q8WUY9
AK001166 BAA91529 Q8WUY9
AK002114 BAA92089 Q8WUY9
AK290684 BAF83373 Q8WUY9
AK299242 BAG61273 B4DRG1
AK300782 BAG62446 Q8WUY9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DEPDC1B NP_060839 M.musculus Depdc1b 218581 Gene Info NP_848798 94
R.norvegicus Depdc1b 310074   NP_001101121 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)