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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LRRC8D, Leucine rich repeat containing 8 family, member D
Sequence ID:NM_001134479
NM_018103
Entrez Gene ID:55144
Ensembl ID:ENSG00000171492

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 90399149 - 90401559

 Exon Info From UCSC:
NM_001134479
NM_018103

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3958069Full LengthBC024159leucine rich repeat containing 8 family, member D

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060573  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001134479 NP_001127951    
NM_018103 NP_060573 Q7L1W4 LRR_1

Related Sequences

 
mRNAGenPeptSwissProt
BC009486 AAH09486 Q96GG5
BC024159 AAH24159 Q7L1W4
AY358874 AAQ89233 Q7L1W4
AK001332 BAA91631 Q7L1W4
AK222787 BAD96507 Q53GZ4
AK092238 BAG52503 B3KRU1
AL832952 CAH56273 Q658W7
AL831880 CAH56285 Q659A9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LRRC8D NP_001127951 M.musculus Lrrc8d 231549 Gene Info NP_848816 96
R.norvegicus Lrrc8d 305131   NP_001008339 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)