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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TARS, threonyl-tRNA synthetase
Sequence ID:NM_001258437
NM_001258438
NM_152295
NR_047676
NR_047677
NR_047678
Entrez Gene ID:6897
Ensembl ID:ENSG00000113407

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 33441069 - 33468190


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822851Full LengthBC000517threonyl-tRNA synthetase
3458845Full LengthBC010578threonyl-tRNA synthetase
6502716IncompleteBC088355threonyl-tRNA synthetase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689508  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001258437 NP_001245366      
NM_001258438 NP_001245367      
NM_152295 NP_689508 P26639 EC 6.1.1.3 tRNA-synt_2b
TGS
HGTP_anticodon
tRNA_SAD

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M63180 AAB04939 P26639 EC 6.1.1.3
BC000517 AAH00517 P26639 EC 6.1.1.3
BC010578 AAH10578 P26639 EC 6.1.1.3
BC088355 AAH88355 Q5M7Z9  
DQ891416 ABM82342    
DQ894590 ABM85516    
EU831444 ACE87131    
AK222804 BAD96524 Q53GX7  
AK292346 BAF85035 P26639 EC 6.1.1.3
AK315713 BAG38072 B2RDX5  
AK095852 BAG53144 B3KTN2  
AK293620 BAG57079 B4DEG8  
AK296783 BAG59361 B4DKZ9  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TARS NP_689508 R.norvegicus Tars 294810   NP_001006977 96
M.musculus Tars 110960 Gene Info NP_149065 95
D.melanogaster Aats-thr 45784   NP_723725 75
A.gambiae AgaP_AGAP008929 1279900   XP_319682 73
C.elegans trs-1 174790   NP_001022033 64
S.pombe trs1 2540550   NP_596364 59
S.cerevisiae THS1 854732   NP_116578 58
A.thaliana AT5G26830 832741   NP_198035 58
N.crassa NCU02380 3875932   XP_959801 56
P.falciparum PF11_0270 810817   XP_001347941 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)