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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. PAPD7, PAP associated domain containing 7
Sequence ID:NM_001171805
Entrez Gene ID:11044
Ensembl ID:ENSG00000112941

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5p15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 6737619 - 6757157

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6380576Full LengthBC084567polymerase (DNA directed) sigma
8991822Full LengthBC126106polymerase (DNA directed) sigma
9052398Full LengthBC143882polymerase (DNA directed) sigma
40125688Full LengthBC117137polymerase (DNA directed) sigma

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008930  

Protein Infomation

NM_001171805 NP_001165276      
NM_001171806 NP_001165277      
NM_006999 NP_008930 Q5XG87 EC NTP_transf_2

Related Sequences

AF089896 AAD45198 Q5XG87 EC
BC084567 AAH84567 Q5XG87 EC
BC117137 AAI17138 Q5XG87 EC
BC126106 AAI26107 Q5XG87 EC
BC143882 AAI43883 B7ZLL4  
HQ258305 ADR83059    
AB005754 BAA24434 Q5XG87 EC
AK289857 BAF82546 Q5XG87 EC
AK303516 BAG64545 B4E0T3  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens PAPD7 NP_008930 M.musculus Papd7 210106 Gene Info NP_941002 95
R.norvegicus Papd7 306672   NP_001100803 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)