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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SPOCK3, sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
Sequence ID:NM_001040159
NM_001204352
NM_001204353
NM_001204354
NM_001204355
NM_001204356
NM_001204358
NM_001251967
NM_016950
NM_001204359
RefSeqGene ID:NG_030414
Entrez Gene ID:50859
Ensembl ID:ENSG00000196104

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q32.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 167675236 - 168155703

 Exon Info From UCSC:
NM_001040159
NM_016950

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822303Full LengthBC000460sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
2822303Full LengthBC003017sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
4110883Full LengthBC013983sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058646  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001040159 NP_001035249    
NM_001204352 NP_001191281    
NM_001204353 NP_001191282    
NM_001204354 NP_001191283    
NM_001204355 NP_001191284    
NM_001204356 NP_001191285    
NM_001204358 NP_001191287    
NM_001251967 NP_001238896    
NM_016950 NP_058646 Q9BQ16 Thyroglobulin_1
Kazal_2

Related Sequences

 
mRNAGenPeptSwissProt
BC000460 AAH00460 Q9BQ16
BC003017 AAH03017 Q9BQ16
BC013983 AAH13983 Q9BQ16
AY358973 AAQ89332 Q9BQ16
HQ447688 ADQ32173  
AB056866 BAB64908 Q9BQ16
AK313042 BAG35874 Q9BQ16
AK091078 BAG52279 Q9BQ16
AK294293 BAG57576 B4DFW5
AK294346 BAG57615 B4DG04
AK294637 BAG57816 B4DGK5
AK295015 BAG58075 Q9BQ16
AK295281 BAG58265 B4DHV3
AK295407 BAG58358 B4DI46
AK295414 BAG58364 B4DI52
AK296291 BAG58995 B4DJY3
AJ001454 CAA04775 Q9BQ16

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SPOCK3 NP_058646 M.musculus Spock3 72902 Gene Info NP_076178 90
R.norvegicus Spock3 306404   NP_001100780 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)