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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. APBB2, amyloid beta (A4) precursor protein-binding, family B, member 2
Sequence ID:NM_001166050
NM_001166051
NM_001166052
NM_001166053
NM_001166054
NM_004307
NM_173075
RefSeqGene ID:NG_013337
Entrez Gene ID:323
Ensembl ID:ENSG00000163697

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
ALZHEIMER DISEASEA2M
ACE
APP
BLMH
HFE
MPO
NOS3
PAXIP1
PLAU
SORL1

Cytogenetic Location (from UniGene)

Cytogenetic Location:4p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 40821214 - 40937643

 Exon Info From UCSC:
NM_001166050
NM_001166051
NM_001166052
NM_001166053
NM_001166054
NM_004307
NM_173075

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5203925Full LengthBC027946amyloid beta (A4) precursor protein-binding, family B, member 2
30377497IncompleteBC088372amyloid beta (A4) precursor protein-binding, family B, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_775098  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001166050 NP_001159522 Q92870  
NM_001166051 NP_001159523    
NM_001166052 NP_001159524    
NM_001166053 NP_001159525    
NM_001166054 NP_001159526    
NM_004307 NP_004298    
NM_173075 NP_775098   WW
PID

Related Sequences

 
mRNAGenPeptSwissProt
BC027946 AAH27946 Q92870
BC088372 AAH88372 Q5I0G1
DQ891553 ABM82479  
DQ894740 ABM85666  
AK289838 BAF82527 A8K1C3
AK295974 BAG58750 B4DJ88
AK299800 BAG61676 Q92870
AK304247 BAG65114 B4E2F2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens APBB2 NP_004298 M.musculus Apbb2 11787 Gene Info NP_033816 94
R.norvegicus Apbb2 305338   XP_223399 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)