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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CD38, CD38 molecule
Sequence ID:NM_001775
Entrez Gene ID:952
Ensembl ID:ENSG00000004468

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4p15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 15780055 - 15850878

NM_001775 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13401577993015780269
3414701581813315818262
4716061582650315826638
6076921583583915835924
6937661583971415839787
7678591584164815841740
8609461584207415842160
94714911585016115850705

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4309086Full LengthBC007964CD38 molecule

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001766  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001775 NP_001766 P28907 EC 3.2.2.5 Rib_hydrolayse

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M34461 AAA68482 P28907 EC 3.2.2.5
BC007964 AAH07964 P28907 EC 3.2.2.5
DQ893184 ABM84110    
EU176777 ABW03578    
D84276 BAA18964 P28907 EC 3.2.2.5
D84277 BAA18965 P28907 EC 3.2.2.5
AK313268 BAG36077 B2R880  
AK297592 BAG59979 B4DMR7  
AK303169 BAG64268 B4E006  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CD38 NP_001766 M.musculus Cd38 12494 Gene Info NP_031672 60
R.norvegicus Cd38 25668   NP_037259 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)