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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HTRA3, HtrA serine peptidase 3
Sequence ID:NM_053044
Entrez Gene ID:94031
Ensembl ID:ENSG00000170801

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4p16.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 8297703 - 8298205

NM_053044 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
158982714918272079
59068982841638284262
69091282882878288509
913110782930968293290
1108114082940478294079
1141125582958138295927
1256130483041898304237
1305140083059108306005
1401253383076978308829

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5180585Full LengthBC034390HtrA serine peptidase 3
5588608Full LengthBC035717HtrA serine peptidase 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444272  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_053044 NP_444272 P83110 Trypsin
PDZ
Kazal_2

Related Sequences

 
mRNAGenPeptSwissProt
BC034390 AAH34390 P83110
BC035717 AAH35717 P83110
AY040094 AAK71475 P83110
AY280665 AAP42282 P83110
AY280666 AAP42283 P83110
DQ891188 ABM82114  
DQ894371 ABM85297  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HTRA3 NP_444272 M.musculus Htra3 78558 Gene Info NP_084403 93
R.norvegicus Htra3 360959   XP_341238 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)