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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IL1RAP, interleukin 1 receptor accessory protein
Sequence ID:NM_001167928
NM_001167929
NM_001167930
NM_001167931
NM_002182
NM_134470
RefSeqGene ID:NG_029105
Entrez Gene ID:3556
Ensembl ID:ENSG00000196083

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q28Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 190231890 - 190369301

 Exon Info From UCSC:
NM_001167928
NM_001167929
NM_001167930
NM_001167931
NM_002182
NM_134470

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6160894Full LengthBC053621interleukin 1 receptor accessory protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002173  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001167928 NP_001161400    
NM_001167929 NP_001161401    
NM_001167930 NP_001161402    
NM_001167931 NP_001161403    
NM_002182 NP_002173 Q9NPH3 TIR
NM_134470 NP_608273    

Related Sequences

 
mRNAGenPeptSwissProt
AF029213 AAB84059 Q9NPH3
AF167343 AAF71687 Q9NPH3
BC053621 AAH53621 Q9NPH3
AF487335 AAO49451 Q9NPH3
AF538730 AAQ01755 Q9NPH3
AF538731 AAQ01756 Q9NPH3
AF538732 AAQ01757 Q9NPH3
AF538733 AAQ01758 Q9NPH3
AF538734 AAQ01759 Q9NPH3
EF591790 ABU90811 Q9NPH3
FJ998418 ACR82488 Q9NPH3
HQ448120 ADQ32601  
AB006537 BAA25421 Q9NPH3
AK095107 BAC04487 Q8N9C1
AK291669 BAF84358 A8K6K4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IL1RAP NP_001161403 M.musculus Il1rap 16180 Gene Info NP_001152790 89
R.norvegicus Il1rap 25466   NP_001161312 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta