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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BCL6, B-cell CLL/lymphoma 6
Sequence ID:NM_001130845
NM_001134738
NM_001706
NM_138931
RefSeqGene ID:NG_007149
Entrez Gene ID:604
Ensembl ID:ENSG00000113916

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q27Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 187455563 - 187457726

 Exon Info From UCSC:
NM_001130845
NM_001134738
NM_001706

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40148297Full LengthBC150184B-cell CLL/lymphoma 6
40148809Full LengthBC142705B-cell CLL/lymphoma 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001697  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001130845 NP_001124317    
NM_001134738 NP_001128210    
NM_001706 NP_001697 P41182 zf-C2H2
BTB

Related Sequences

 
mRNAGenPeptSwissProt
U00115 AAC50054 P41182
BC142705 AAI42706 A5PL18
BC150184 AAI50185 P41182
EU139066 ABX45135 P41182
EU883531 ACG60659 B5B0A5
AK304325 BAG65174 B4E2L2
Z21943 CAA79937 P41182
BX649185 CAE46203  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BCL6 NP_001124317 R.norvegicus Bcl6 303836   NP_001100554 95
M.musculus Bcl6 12053 Gene Info NP_033874 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)