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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MAP6D1, MAP6 domain containing 1
Sequence ID:NM_024871
Entrez Gene ID:79929
Ensembl ID:ENSG00000180834

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q27.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 183533669 - 183543365

NM_024871 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
171577183533663183535223
15781695183535781183535898
16962154183542934183543392

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3937613Full LengthBC006434MAP6 domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079147  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024871 NP_079147 Q9H9H5 STOP

Related Sequences

 
mRNAGenPeptSwissProt
BC006434 AAH06434 Q9H9H5
AK022810 BAB14254 Q9H9H5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MAP6D1 NP_079147 M.musculus Map6d1 208158 Gene Info NP_941001 76
R.norvegicus Map6d1 363823   NP_001102314 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)