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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATP11B, ATPase, class VI, type 11B
Sequence ID:NM_014616
Entrez Gene ID:23200
Ensembl ID:ENSG00000058063

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q27Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 182584125 - 182639415

 Exon Info From UCSC:
NM_014616

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3853179IncompleteBC010630ATPase, class VI, type 11B
100015500BC148558ATPase, class VI, type 11B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055431  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_014616 NP_055431 Q9Y2G3 EC 3.6.3.1 Hydrolase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF156548 AAF09446 Q9Y2G3 EC 3.6.3.1
BC010630 AAH10630 Q9Y2G3 EC 3.6.3.1
BC033880 AAH33880 Q8N4L6  
BC042180 AAH42180 Q9Y2G3 EC 3.6.3.1
BC148558 AAI48559    
AB023173 BAA76800 Q9Y2G3 EC 3.6.3.1
AK093727 BAG52754 B3KSJ2  
AK296750 BAG59333 B4DKX1  
AK304855 BAG65593 B4E3T1  
AL133061 CAB61385 Q9Y2G3 EC 3.6.3.1
BX537779 CAD97838 Q7Z678  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP11B NP_055431 M.musculus Atp11b 76295 Gene Info NP_083846 94
R.norvegicus Atp11b 361929   XP_342229 93
A.gambiae AgaP_AGAP000390 1271858   XP_310713 45
D.melanogaster CG4301 32610   NP_573125 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)