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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NLGN1, neuroligin 1
Sequence ID:NM_014932
Entrez Gene ID:22871
Ensembl ID:ENSG00000169760

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q26.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 173302476 - 174000913

NM_014932 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
134173116243173116276
35103173152799173152867
104916173322068173322880
9171069173525469173525621
10701282173993104173993316
12832072173996650173997439
20734918173998270174001115

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5558890Full LengthBC032555neuroligin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055747  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014932 NP_055747   COesterase
Abhydrolase_3

Related Sequences

 
mRNAGenPeptSwissProt
BC032555 AAH32555 Q8N2Q7
DQ891239 ABM82165  
EU176566 ABW03367  
GQ489206 ADB12633 D2X2H5
AB028993 BAA83022 Q8N2Q7
AK074522 BAC11039 Q8N2Q7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NLGN1 NP_055747 M.musculus Nlgn1 192167 Gene Info NP_001156859 98
R.norvegicus Nlgn1 116647   NP_446320 98
A.gambiae AgaP_AGAP002090 1281357   XP_320952 41
D.melanogaster neuroligin 33962   NP_523496 41
C.elegans nlg-1 181484   NP_510283 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)