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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PDCD10, programmed cell death 10
Sequence ID:NM_007217
NM_145859
NM_145860
RefSeqGene ID:NG_008158
Entrez Gene ID:11235
Ensembl ID:ENSG00000114209

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q26.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 167401698 - 167452630

 Exon Info From UCSC:
NM_007217
NM_145859
NM_145860

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3050540Full LengthBC002506programmed cell death 10
4092244Full LengthBC016353programmed cell death 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009148  NP_665858  NP_665859  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007217 NP_009148 Q9BUL8 DUF1241
NM_145859 NP_665858 Q9BUL8 DUF1241
NM_145860 NP_665859 Q9BUL8 DUF1241

Related Sequences

 
mRNAGenPeptSwissProt
AF022385 AAB72225 Q9BUL8
BC002506 AAH02506 Q9BUL8
BC016353 AAH16353 Q9BUL8
DQ892583 ABM83509  
DQ895799 ABM86725  
AK291130 BAF83819 Q9BUL8
CR457107 CAG33388 Q9BUL8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDCD10 NP_665859 M.musculus Pdcd10 56426 Gene Info NP_062719 100
R.norvegicus Pdcd10 494345   NP_001009542 98
A.gambiae AgaP_AGAP008287 5668296   XP_001689007 54
D.melanogaster CG5073 41876   NP_650459 51
C.elegans C14A4.11 174638   NP_496290 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)