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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EEFSEC, eukaryotic elongation factor, selenocysteine-tRNA-specific
Sequence ID:NM_021937
Entrez Gene ID:60678
Ensembl ID:ENSG00000132394

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 127872560 - 128127489

NM_021937 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1354127872312127872665
355562127965678127965885
563659127980970127981066
660824127983459127983623
8251481128060075128060731
14821638128077059128077215
16392215128126911128127487

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4120858Full LengthBC007933eukaryotic elongation factor, selenocysteine-tRNA-specific

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021937 NP_068756 P57772  

Related Sequences

 
mRNAGenPeptSwissProt
AF268872 AAG13375 P57772
BC007933 AAH07933 Q96HZ6
DQ893258 ABM84184  
DQ896587 ABM87586  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EEFSEC NP_068756 M.musculus Eefsec 65967 Gene Info NP_075547 90
A.gambiae AgaP_AGAP006250 1276909   XP_316316 50
D.melanogaster EfSec 37444   NP_611584 49
C.elegans selb-1 173172   NP_493275 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)