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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SEC22A, SEC22 vesicle trafficking protein homolog A (S. cerevisiae)
Sequence ID:NM_012430
Entrez Gene ID:26984
Ensembl ID:ENSG00000121542

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 122920808 - 122991355

NM_012430 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
160122920773122920832
61261122928045122928245
262425122942405122942568
426620122943949122944143
621736122964745122964860
737802122978370122978435
8033414122990368122992979

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3459649Full LengthBC007122SEC22 vesicle trafficking protein homolog A (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036562  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012430 NP_036562 Q96IW7 Synaptobrevin

Related Sequences

 
mRNAGenPeptSwissProt
AF100749 AAD43013 Q96IW7
BC007122 AAH07122 Q96IW7
HQ447819 ADQ32303  
AK315771 BAG38123 Q96IW7
AK057587 BAG51938 B3KQ76

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SEC22A NP_036562 M.musculus Sec22a 317717 Gene Info NP_598465 97
R.norvegicus Sec22a 117513   NP_476488 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)