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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CCDC80, coiled-coil domain containing 80
Sequence ID:NM_199511
NM_199512
Entrez Gene ID:151887
Ensembl ID:ENSG00000091986

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 112324111 - 112359590

 Exon Info From UCSC:
NM_199511
NM_199512

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6205672Full LengthBC110842coiled-coil domain containing 80
40068210Full LengthBC116178coiled-coil domain containing 80
4874518IncompleteBC042128coiled-coil domain containing 80
6179924IncompleteBC073164coiled-coil domain containing 80
30707734IncompleteBC086876coiled-coil domain containing 80

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_199511 NP_955805 Q76M96  
NM_199512 NP_955806 Q76M96  

Related Sequences

 
mRNAGenPeptSwissProt
BC042105 AAH42105 Q76M96
BC073164 AAH73164 Q76M96
BC086876 AAH86876 Q76M96
BC110842 AAI10843 Q76M96
BC116178 AAI16179 Q76M96
AF506819 AAM33633 Q76M96
AY333429 AAQ96742 Q76M96
AY548106 AAS66643 Q76M96
AY548107 AAS66644 Q76M96
AY526612 AAS92235 Q76M96
AK075210 BAC11475 Q76M96
AB052098 BAD05134 Q76M96
AB266387 BAF48770 A3KC71
AK292881 BAF85570 A8KA16
AK304561 BAG65354 B4E342
BX647817 CAH56167 Q76M96
BX647117 CAH56178 Q76M96
AL833034 CAH56325 Q76M96

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCDC80 NP_955806 M.musculus Ccdc80 67896 Gene Info NP_080715 85
R.norvegicus Ccdc80 64387   NP_071988 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)