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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CPOX, coproporphyrinogen oxidase
Sequence ID:NM_000097
RefSeqGene ID:NG_015994
Entrez Gene ID:1371
Ensembl ID:ENSG00000080819

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 98299213 - 98312385

NM_000097 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2213449829829198299613
134514499830025098300354
145016689830428498304502
166918109830755698307697
181119219830947598309585
192220659830985598309998
206627289831179298312454

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3161428Full LengthBC023551coproporphyrinogen oxidase
3607724Full LengthBC023554coproporphyrinogen oxidase
3956896Full LengthBC017210coproporphyrinogen oxidase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000088  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000097 NP_000088 P36551 EC 1.3.3.3 Coprogen_oxidas

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC017210 AAH17210 P36551 EC 1.3.3.3
BC023551 AAH23551 P36551 EC 1.3.3.3
BC023554 AAH23554 P36551 EC 1.3.3.3
D16611 BAA04033 P36551 EC 1.3.3.3
AK223481 BAD97201 P36551 EC 1.3.3.3
AK290140 BAF82829 P36551 EC 1.3.3.3
AK299692 BAG61597 B4DSD5  
Z28409 CAA82250 P36551 EC 1.3.3.3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CPOX NP_000088 M.musculus Cpox 12892 Gene Info NP_031783 82
R.norvegicus Cpox 304024   NP_001032172 82
A.gambiae AgaP_AGAP004749 1278476   XP_001689093 65
D.melanogaster Coprox 44701   NP_524777 63
A.thaliana LIN2 839489   NP_171847 55
S.cerevisiae HEM13 851614   NP_010329 55
N.crassa NCU01546 3872409   XP_956249 54
S.pombe hem13 2541934   NP_593150 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta