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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TMEM48, transmembrane protein 48
Sequence ID:NM_001168551
NM_018087
NR_033142
Entrez Gene ID:55706
Ensembl ID:ENSG00000058804

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p32.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 54233392 - 54304108

 Exon Info From UCSC:
NM_001168551
NM_018087

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3509727Full LengthBC003082transmembrane protein 48

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001168551 NP_001162023    
NM_018087 NP_060557 Q9BTX1  

Related Sequences

 
mRNAGenPeptSwissProt
BC003082 AAH03082 Q9BTX1
DQ141696 AAZ73087 Q9BTX1
AK001269 BAA91592 Q9BTX1
AK022618 BAB14135 Q9BTX1
AK091439 BAC03665 Q9BTX1
AK295000 BAG58064 B4DHA3
AK298909 BAG61017 B4DQQ5
AK302910 BAG64078 B4DZG6
AL354612 CAB89725 Q9BTX1
AL354613 CAB89726 Q9BTX1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TMEM48 NP_060557 M.musculus Tmem48 72787 Gene Info NP_082631 88
R.norvegicus Tmem48 362557   NP_001020194 87
A.gambiae AgaP_AGAP004558 1274699   XP_313856 28
D.melanogaster CG5857 42825   NP_651191 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)