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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLMAP, sarcolemma associated protein
Sequence ID:NM_007159
Entrez Gene ID:7871
Ensembl ID:ENSG00000163681

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.2-p14.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 57827042 - 57914894

 Exon Info From UCSC:
NM_007159

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40081892Full LengthBC114627sarcolemma associated protein
40081893Full LengthBC115701sarcolemma associated protein

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007159 NP_009090    

Related Sequences

 
mRNAGenPeptSwissProt
AF100750 AAD43014 Q14BN4
AF304450 AAG41949 Q14BN4
BC114627 AAI14628 Q14BN4
BC115701 AAI15702 Q14BN4
AY358410 AAQ88776 Q14BN4
AB046821 BAB13427 Q14BN4
AK124200 BAC85803 Q14BN4
AK300106 BAH13213 B7Z6C7
AK302934 BAH13849 B7Z863
AK304493 BAH14200 B7Z964
AK316436 BAH14807 B7Z964
AL834538 CAD39194 Q14BN4
CR627321 CAH10369 Q14BN4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLMAP NP_009090 M.musculus Slmap 83997 Gene Info NP_114397 91
R.norvegicus Slmap 290533   NP_001099530 91
A.gambiae AgaP_AGAP011663 1280976   XP_320850 47
C.elegans M4.1 187433   NP_001023326 37
D.melanogaster CG17494 3355127   NP_001036399 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)