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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DCP1A, DCP1 decapping enzyme homolog A (S. cerevisiae)
Sequence ID:NM_018403
Entrez Gene ID:55802

Database Links

UniGeneEntrez GeneOMIMHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 53321384 - 53381570

NM_018403 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1642475331744653321677
424844715332208253322305
447245325332482553324885
453352915332609853326856
529254055333820653338319
540655445334627053346408
554556115335343353353499
561257395337617053376297
574057805337892853378968
578160255338140953381653

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3029175Full LengthBC007439DCP1 decapping enzyme homolog A (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060873  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018403 NP_060873   DCP1

Related Sequences

 
mRNAGenPeptSwissProt
BC007439 AAH07439 Q9NPI6
AY146651 AAN62763 Q9NPI6
DQ893260 ABM84186  
DQ896589 ABM87588  
AK001969 BAA92008 Q9NPI6
AB075507 BAE45754 Q3LIB4
AK295205 BAG58201 B4DHN9
AJ275986 CAB77023 Q9NPI6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DCP1A NP_060873 M.musculus Dcp1a 75901 Gene Info NP_598522 90
R.norvegicus Dcp1a 361109   XP_341396 88
A.gambiae AgaP_AGAP012645 4397654   XP_001230450 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)