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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PBRM1, polybromo 1
Sequence ID:NM_018313
NM_018165
NM_181041
NM_181042
RefSeqGene ID:NG_032108
Entrez Gene ID:55193
Ensembl ID:ENSG00000163939

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

 Exon Info From UCSC:
NM_018313
NM_018165
NM_181042

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7962003Full LengthBC115009polybromo 1
7962010Full LengthBC115011polybromo 1
40082629Full LengthBC129934polybromo 1
40082630Full LengthBC129935polybromo 1
3066268IncompleteBC089409polybromo 1
7962007IncompleteBC115010polybromo 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018313 NP_060783    

Related Sequences

 
mRNAGenPeptSwissProt
AF197569 AAG34760 Q86U86
AF177387 AAG48933 Q86U86
AF225870 AAG48939 Q86U86
AF225871 AAG48940 Q86U86
AF225872 AAG48941 Q86U86
BC015323 AAH15323 Q9NVM2
BC070273 AAH70273 Q6IRX1
BC089409 AAH89409 Q5EBM5
BC115009 AAI15010 Q86U86
BC115010 AAI15011 Q86U86
BC115011 AAI15012 Q86U86
BC129934 AAI29935 Q86U86
BC129935 AAI29936 Q86U86
AY281068 AAP34197 Q86U86
AK001507 BAA91728 Q9NVM2
AK001926 BAA91982 Q9NUX9
AK056541 BAB71210 Q86U86

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PBRM1 NP_060635 M.musculus Pbrm1 66923 Gene Info NP_001074720 98
R.norvegicus Pbrm1 306254   XP_240329 97
A.gambiae AgaP_AGAP001099 1282065   XP_322068 43
D.melanogaster polybromo 42954   NP_651288 43
C.elegans pbrm-1 172504   NP_001021008 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)