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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CACNA2D2, calcium channel, voltage-dependent, alpha 2/delta subunit 2
Sequence ID:NM_001005505
NM_001174051
NM_006030
Entrez Gene ID:9254
Ensembl ID:ENSG00000007402

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 50400232 - 50540855

 Exon Info From UCSC:
NM_001005505
NM_001174051
NM_006030

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862560Full LengthBC152438calcium channel, voltage-dependent, alpha 2/delta subunit 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006021  NP_001005505  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001005505 NP_001005505   VWA
Cache_1
VWA_N
VGCC_alpha2
NM_001174051 NP_001167522 Q9NY47  
NM_006030 NP_006021   VWA
Cache_1
VWA_N
VGCC_alpha2

Related Sequences

 
mRNAGenPeptSwissProt
AF042792 AAB96913 Q9NY47
AF042793 AAB96914 Q9NY47
AF040709 AAC70914 Q9NY47
BC152438 AAI52439 Q9NY47
AB011130 BAA25484 Q9NY47
AJ251367 CAB86192 Q9NY47
AJ251368 CAB86193 Q9NY47

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CACNA2D2 NP_001005505 R.norvegicus Cacna2d2 300992   NP_783182 97
M.musculus Cacna2d2 56808 Gene Info NP_001167518 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)