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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TBC1D5, TBC1 domain family, member 5
Sequence ID:NM_014744
NM_001134380
NM_001134381
Entrez Gene ID:9779
Ensembl ID:ENSG00000131374

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 17202454 - 17550062

 Exon Info From UCSC:
NM_014744
NM_001134380
NM_001134381

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4510019Full LengthBC013145TBC1 domain family, member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055559  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001134380 NP_001127852    
NM_001134381 NP_001127853    
NM_014744 NP_055559 Q92609 TBC

Related Sequences

 
mRNAGenPeptSwissProt
BC013145 AAH13145 Q92609
JF432743 ADZ15960  
D86965 BAA13201 Q92609
AB449886 BAH16629 B9A6K1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TBC1D5 NP_001127853 M.musculus Tbc1d5 72238 Gene Info NP_082438 90
R.norvegicus Tbc1d5 501088   NP_001128234 89
C.elegans rbg-3 175629   NP_497979 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)