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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ERCC6L, excision repair cross-complementing rodent repair deficiency, complementation group 6-like
Sequence ID:NM_001009954
NM_017669
RefSeqGene ID:NG_016328
Entrez Gene ID:54821
Ensembl ID:ENSG00000186871

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 71424514 - 71426810

Transcript StartTranscript EndChromosomal Start Chromosomal End
1840597142450671428547
406042247145869371458857

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5529990Full LengthBC111486excision repair cross-complementing rodent repair deficiency, complementation group 6-like
3951541IncompleteBC008808excision repair cross-complementing rodent repair deficiency, complementation group 6-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060139  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_017669 NP_060139 Q2NKX8 EC 3.6.4.12 SNF2_N
Helicase_C
TPR_1
TPR_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC008808 AAH08808 Q2NKX8 EC 3.6.4.12
BC111486 AAI11487 Q2NKX8 EC 3.6.4.12
AY121802 AAM82750 Q2NKX8 EC 3.6.4.12
EU069463 ABU25227 Q2NKX8 EC 3.6.4.12
AK000112 BAA90952 Q2NKX8 EC 3.6.4.12
AK074719 BAC11160 Q2NKX8 EC 3.6.4.12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ERCC6L NP_060139 M.musculus Ercc6l 236930 Gene Info NP_666347 75
R.norvegicus Ercc6l 317252   XP_228546 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)