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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. XPC, xeroderma pigmentosum, complementation group C
Sequence ID:NM_001145769
NM_004628
NR_027299
RefSeqGene ID:NG_011763
Entrez Gene ID:7508
Ensembl ID:ENSG00000154767

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
XERODERMA PIGMENTOSUM, GROUP C 

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 14186647 - 14214462

 Exon Info From UCSC:
NM_001145769
NM_004628

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4509957Full LengthBC016620xeroderma pigmentosum, complementation group C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004619  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145769 NP_001139241    
NM_004628 NP_004619 Q01831 Rad4

Related Sequences

 
mRNAGenPeptSwissProt
BC016620 AAH16620 Q01831
EU530522 ACD74563 D2CPJ2
EU530523 ACD74564 D2CPJ3
EU530524 ACD74565 D2CPJ4
EU530525 ACD74566 D2CPJ5
EU530526 ACD74567 D2CPJ4
EU530527 ACD74568 D2CPJ5
EU530529 ACD74569 D2CPK0
EU530531 ACD74570 D2CPK4
EU530532 ACD74571 D2CPK5
EU530533 ACD74572 D2CPK6
EU530534 ACD74573 D2CPK7
HM113488 ADI50189 D9I4E1
D21089 BAA04651 Q01831
AK222844 BAD96564 Q01831
AK289761 BAF82450 A8K146
AK295711 BAG58555 B4DIP3
X65024 CAA46158 Q01831

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens XPC NP_004619 R.norvegicus Xpc 312560   NP_001101344 76
M.musculus Xpc 22591 Gene Info NP_033557 75
A.gambiae AgaP_AGAP003345 1275022   XP_314244 37
A.gambiae AgaP_AGAP002106 4577180   XP_001238403 36
A.thaliana RAD4 831525   NP_197166 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)