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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NUP210, Nucleoporin 210kDa
Sequence ID:NM_024923
Entrez Gene ID:23225
Ensembl ID:ENSG00000132182

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 13357736 - 13384747

 Exon Info From UCSC:
NM_024923

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6281693Full LengthBC067089nucleoporin 210kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079199  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024923 NP_079199 Q8TEM1 Big_2

Related Sequences

 
mRNAGenPeptSwissProt
BC067089 AAH67089 Q8TEM1
AB020713 BAA74929 Q8TEM1
AK026042 BAB15332 Q8TEM1
AK074101 BAB84927 Q8TEM1
AK075545 BAC11688 Q8TEM1
AL117527 CAB55979 Q8TEM1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NUP210 NP_079199 M.musculus Nup210 54563 Gene Info NP_061285 85
R.norvegicus Nup210 58958   NP_445774 84
D.melanogaster gp210 35512   NP_610184 29
C.elegans npp-12 172348   NP_491855 28
A.gambiae AgaP_AGAP006280 1276934   XP_316344 27
A.thaliana EMB3012 834046   NP_198864 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta