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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TMEM40, Transmembrane protein 40
Sequence ID:NM_018306
Entrez Gene ID:55287
Ensembl ID:ENSG00000088726

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p25.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 12775414 - 12800740

 Exon Info From UCSC:
NM_018306

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4768606Full LengthBC020658transmembrane protein 40

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018306 NP_060776 Q8WWA1  

Related Sequences

 
mRNAGenPeptSwissProt
BC020658 AAH20658 Q8WWA1
AK001898 BAA91967 Q8WWA1
AK092470 BAC03898 Q8WWA1
AK301984 BAG63392 B4DXI0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TMEM40 NP_060776 M.musculus Tmem40 94346 Gene Info NP_001161728 79
R.norvegicus Tmem40 680858   XP_001059205 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)