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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZBED4, Zinc finger, BED-type containing 4
Sequence ID:NM_014838
Entrez Gene ID:9889
Ensembl ID:ENSG00000100426

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 50247528 - 50282090

NM_014838 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11415024749650247636
14268865027698150283725

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862564Full LengthBC167155zinc finger, BED-type containing 4
40038569Full LengthBC117670zinc finger, BED-type containing 4
40038576IncompleteBC117671zinc finger, BED-type containing 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055653  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014838 NP_055653 O75132 zf-BED
hATC

Related Sequences

 
mRNAGenPeptSwissProt
BC117670 AAI17671 O75132
BC167155 AAI67155 O75132
AB014537 BAA31612 O75132
CR456387 CAG30273 O75132
CU012946 CAK54377  
CU013234 CAK54676  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZBED4 NP_055653 M.musculus Zbed4 223773 Gene Info NP_852077 83
M.musculus Gm15583 100043240 Gene Info XP_001480230 83
R.norvegicus Zbed4 315211   NP_001128272 83
C.elegans transposase 182029   NP_499862 32
C.elegans C10A4.1 182482   NP_509255 26
D.melanogaster CG13775 33975   NP_609087 26
C.elegans transposase 187182   NP_510202 26
C.elegans C53D6.6 177720   NP_501570 23

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)