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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RTN2, Reticulon 2
Sequence ID:NM_005619
NM_206900
NM_206901
RefSeqGene ID:NG_032157
Entrez Gene ID:6253
Ensembl ID:ENSG00000125744

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 45988553 - 46000212

 Exon Info From UCSC:
NM_005619
NM_206900
NM_206901

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5242827Full LengthBC073874reticulon 2
4586895IncompleteBC014244reticulon 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005610  NP_996783  NP_996784  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005619 NP_005610 O75298 Reticulon
NM_206900 NP_996783   Reticulon
NM_206901 NP_996784   Reticulon

Related Sequences

 
mRNAGenPeptSwissProt
AF038540 AAC14910 O75298
AF004222 AAC32542 O75298
AF004223 AAC32543 O75298
AF004224 AAC32544 O75298
BC073874 AAH73874 Q6GMT0
AK291967 BAF84656 A8K7F2
BK001687 DAA01932 O75298
BK001688 DAA01933 O75298
BK001689 DAA01934 Q7RTN0
BK001690 DAA01935 Q7RTM9
BK001691 DAA01936 Q96CG9
BK001686 DAA01944 O75298

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RTN2 NP_996783 M.musculus Rtn2 20167 Gene Info NP_038676 85
R.norvegicus Rtn2 308410   NP_963856 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)