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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ATXN10, Ataxin 10
Sequence ID:NM_013236
NM_001167621
RefSeqGene ID:NG_016212
Entrez Gene ID:25814
Ensembl ID:ENSG00000130638

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
SPINOCEREBELLAR ATAXIA 10 

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 46067734 - 46240054

 Exon Info From UCSC:
NM_013236
NM_001167621

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3030062Full LengthBC007508ataxin 10

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001167621 NP_001161093    
NM_013236 NP_037368 Q9UBB4  

Related Sequences

 
mRNAGenPeptSwissProt
AF119662 AAF17219 Q9UBB4
BC007508 AAH07508 Q9UBB4
AF086923 AAP97153 Q7Z524
DQ893240 ABM84166  
DQ896570 ABM87569  
AK294348 BAG57616 Q9UBB4
AL050282 CAB43383 Q9UBB4
AL137374 CAB70715 Q9NTC6
CR456568 CAG30454 Q9UBB4
CR457381 CAG33662 Q9UBB4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATXN10 NP_037368 R.norvegicus Atxn10 170821   NP_579847 85
M.musculus Atxn10 54138 Gene Info NP_058539 83
A.thaliana MEE50 826583   NP_567156 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)