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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PARVB, parvin, beta
Sequence ID:NM_001003828
NM_001243385
NM_001243386
NM_013327
RefSeqGene ID:NG_029743
Entrez Gene ID:29780
Ensembl ID:ENSG00000188677

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.2-q13.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 44420210 - 44564801

 Exon Info From UCSC:
NM_001003828
NM_013327

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5763848Full LengthBC046103parvin, beta
5757378IncompleteBC039811parvin, beta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037459  NP_001003828  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001003828 NP_001003828   CH
NM_001243385 NP_001230314    
NM_001243386 NP_001230315    
NM_013327 NP_037459 Q9HBI1 CH

Related Sequences

 
mRNAGenPeptSwissProt
AF151814 AAD34051 Q9HBI1
AF237769 AAG27171 Q9HBI1
BC046103 AAH46103 Q9HBI1
AF303887 AAL08219 Q9HBI1
AB048276 BAB62077 Q9HBI1
AK313957 BAG36673 Q9HBI1
AL159142 CAB76900 Q9HBI1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PARVB NP_037459 M.musculus Parvb 170736 Gene Info NP_573395 92
R.norvegicus Parvb 362973   NP_001128252 92
A.gambiae AgaP_AGAP002356 1273600   XP_312593 62
D.melanogaster CG32528 32990   NP_608352 60
C.elegans pat-6 176848   NP_499891 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)