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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SGSM3, Small G protein signaling modulator 3
Sequence ID:NM_015705
Entrez Gene ID:27352
Ensembl ID:ENSG00000100359

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.1-q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 40796803 - 40806108

 Exon Info From UCSC:
NM_015705

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3027777Full LengthBC008078small G protein signaling modulator 3
40131744IncompleteBC127850small G protein signaling modulator 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056520  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015705 NP_056520 Q96HU1 SH3_1
TBC
RUN

Related Sequences

 
mRNAGenPeptSwissProt
BC008078 AAH08078 Q96HU1
BC127850 AAI27851 A1L189
AY308849 AAQ81879 Q96HU1
DQ893271 ABM84197  
DQ896602 ABM87601  
AK000006 BAA92231 Q9NXX9
AB196956 BAE02561 Q96HU1
AB275763 BAF63513 Q96HU1
AK295469 BAG58399 B4DI87
AK297599 BAG59984 B4DMS2
AK301042 BAG62655 B4DVE3
AB449880 BAH16623 B9A6J5
AL137499 CAB70773 Q96HU1
CR456441 CAG30327 Q96HU1
CU013039 CAK54470  
CU013327 CAK54769  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SGSM3 NP_056520 M.musculus Sgsm3 105835 Gene Info NP_598852 94
R.norvegicus Sgsm3 362963   NP_942082 94
A.gambiae AgaP_AGAP002120 1281367   XP_320917 68
D.melanogaster CG12241 41834   NP_650432 66
C.elegans tbc-18 181091   NP_509421 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)