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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CSNK1E, casein kinase 1, epsilon
Sequence ID:NM_001894
NM_152221
RefSeqGene ID:NG_016707
Entrez Gene ID:1454
Ensembl ID:ENSG00000213923

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 38687921 - 38714089

 Exon Info From UCSC:
NM_001894
NM_152221

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3937782Full LengthBC006490casein kinase 1, epsilon

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001885  NP_689407  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001894 NP_001885 P49674
Q5U045
EC 2.7.11.1 Pkinase
NM_152221 NP_689407 P49674
Q5U045
EC 2.7.11.1 Pkinase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L37043 AAC41761 P49674
Q5U045
EC 2.7.11.1
BC006490 AAH06490 P49674
Q5U045
EC 2.7.11.1
BT019831 AAV38634 P49674
Q5U045
EC 2.7.11.1
DQ892612 ABM83538    
DQ895852 ABM86778    
AB024597 BAA92345 P49674
Q5U045
EC 2.7.11.1
AB091043 BAC10902 P49674
Q5U045
EC 2.7.11.1
AK223498 BAD97218 Q53EZ1  
CR456429 CAG30315 P49674
Q5U045
EC 2.7.11.1
CU012990 CAK54421    
CU013278 CAK54720    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CSNK1E NP_001885 M.musculus Csnk1e 27373 Gene Info NP_038795 99
R.norvegicus Csnk1e 58822   NP_113805 99
D.melanogaster dco 43673   NP_733415 85
C.elegans kin-20 181620   NP_001024669 80
A.thaliana ckl12 835804   NP_680447 78
A.thaliana CK1 828716   NP_194340 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta