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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. APOL3, apolipoprotein L, 3
Sequence ID:NM_145640
NM_145641
NM_145642
NR_027833
NR_027834
NR_027835
NM_014349
NM_030644
NM_145639
Entrez Gene ID:80833
Ensembl ID:ENSG00000128284

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 36536376 - 36556811

 Exon Info From UCSC:
NM_145640
NM_145641
NM_145642

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5932779Full LengthBC042918apolipoprotein L, 3
6012757Full LengthBC050596apolipoprotein L, 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_663617  NP_663615  NP_663616  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145640 NP_663615 O95236 ApoL
NM_145641 NP_663616   ApoL
NM_145642 NP_663617   ApoL

Related Sequences

 
mRNAGenPeptSwissProt
AF070675 AAC83233 O95236
AY014902 AAG50344 O95236
AY014903 AAG50345 O95236
AY014904 AAG50346 O95236
AY014905 AAG50347 O95236
AY014906 AAG50348 O95236
AY014907 AAG50349 O95236
BC042918 AAH42918 O95236
BC050596 AAH50596 O95236
AF305227 AAK20213 O95236
CR456379 CAG30265 O95236
CU012937 CAK54368  
CU013225 CAK54667  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens APOL3 NP_663615 M.musculus Apol7c 108956 Gene Info NP_780600 47
M.musculus Apol7a 75761 Gene Info NP_001158112 47
M.musculus Apol7e 666348 Gene Info NP_001128274 46
M.musculus Apol7b 278679 Gene Info NP_001020019 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)