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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LIMK2, LIM domain kinase 2
Sequence ID:NM_016733
NM_005569
NM_001031801
RefSeqGene ID:NG_029895
Entrez Gene ID:3985
Ensembl ID:ENSG00000182541

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 31608394 - 31674426

 Exon Info From UCSC:
NM_016733
NM_005569
NM_001031801

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3861412Full LengthBC013051LIM domain kinase 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005560  NP_057952  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001031801 NP_001026971      
NM_005569 NP_005560 P53671 EC 2.7.11.1 Pkinase
LIM
PDZ
NM_016733 NP_057952     Pkinase
LIM
PDZ

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC013051 AAH13051 P53671 EC 2.7.11.1
D45906 BAA08312 P53671 EC 2.7.11.1
D85527 BAA12827 P53671 EC 2.7.11.1
AK291640 BAF84329 P53671 EC 2.7.11.1
AK314391 BAG37016 B2RAW9  
AK093554 BAG52739 B3KSH7  
AK293774 BAG57190 B4DES9  
AK299112 BAG61168 B4DR56  
AK302553 BAG63822 B4DYR0  
AB451269 BAG70083 B5BU33  
AB451396 BAG70210 B5BU33  
AL117466 CAB55941 P53671 EC 2.7.11.1
CR456513 CAG30399 P53671 EC 2.7.11.1
CU013112 CAK54543    
CU013400 CAK54842    
AM393090 CAL37968    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LIMK2 NP_005560 M.musculus Limk2 16886 Gene Info NP_034848 93
R.norvegicus Limk2 29524   NP_077049 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)