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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HPS4, Hermansky-Pudlak syndrome 4
Sequence ID:NM_022081
NM_152841
NR_073135
NR_073136
NM_152840
NM_152842
NM_152843
RefSeqGene ID:NG_009763
Entrez Gene ID:89781
Ensembl ID:ENSG00000100099

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
HERMANSKY-PUDLAK SYNDROME 1BLOC1S3
DTNBP1
HPS1
HPS3
HPS5
HPS6

Cytogenetic Location (from UniGene)

Cytogenetic Location:22cen-q12.3

Chromosomal Position (from UCSC)

Chromosomal Position:22: 26849077 - 26875454

 Exon Info From UCSC:
NM_022081
NM_152841

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6148557Full LengthBC065030Hermansky-Pudlak syndrome 4
5271351IncompleteBC050285Hermansky-Pudlak syndrome 4

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022081 NP_071364 Q9NQG7  
NM_152841 NP_690054    

Related Sequences

 
mRNAGenPeptSwissProt
BC065030 AAH65030 Q6P1K3
AY043416 AAK95330 Q9NQG7
AB051454 BAB33337 Q9NQG7
AK057648 BAB71540 Q9NQG7
AK290211 BAF82900 A8K2E6
AK095406 BAG53049 B3KTD7
AL365512 CAB97208 Q9NQG7
AL713795 CAD28549 Q9NQG7
Q6ICH6
CR456392 CAG30278 Q6ICH6
CU012967 CAK54398  
CU013255 CAK54697  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HPS4 NP_071364 M.musculus Hps4 192232 Gene Info NP_619587 66
R.norvegicus Hps4 304555   NP_001100618 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)