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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SLC2A1, Solute carrier family 2 (facilitated glucose transporter), member 1
Sequence ID:NM_006516
RefSeqGene ID:NG_008232
Entrez Gene ID:6513
Ensembl ID:ENSG00000117394

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
DYSTONIA 9 
EPILEPSY, IDIOPATHIC GENERALIZED, SUSCPETIBILITY TO, 12 
GLUT1 DEFICIENCY SYNDROME 1 
GLUT1 DEFICIENCY SYNDROME2 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p34.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 43392332 - 43424567

NM_006516 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1818844339104543392911
188520884339327543393478
208921904339460243394703
219122954339488043394984
229624834339526343395450
248426464339554343395705
264728874339629643396536
288830484339671643396876
304931444340889643408991
314536874342430443424846

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40085220Full LengthBC121804solute carrier family 2 (facilitated glucose transporter), member 1
40085221Full LengthBC118590solute carrier family 2 (facilitated glucose transporter), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006507  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006516 NP_006507 P11166 Sugar_tr

Related Sequences

 
mRNAGenPeptSwissProt
K03195 AAA52571 P11166
AF070544 AAC28635 P11166
BC118590 AAI18591 P11166
BC121804 AAI21805 Q0P512
AY034633 AAK56795 P11166
AB208987 BAD92224 Q59GX2
AK292791 BAF85480 P11166
AK312403 BAG35317 P11166
AK122999 BAG53842 B3KVN0
AK293306 BAG56827 B4DDR6
AK296736 BAG59323 B4DKW1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC2A1 NP_006507 R.norvegicus Slc2a1 24778   NP_620182 98
M.musculus Slc2a1 20525 Gene Info NP_035530 97
D.melanogaster Glut1 38109   NP_001097469 52
A.gambiae AgaP_AGAP007340 1269835   XP_308486 51
C.elegans H17B01.1 173525   NP_493981 41
C.elegans R09B5.11 178634   NP_503413 40
S.cerevisiae YBR241C 852543   NP_009800 32
N.crassa NCU07169 3873569   XP_957394 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta