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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLIC6, Chloride intracellular channel 6
Sequence ID:NM_053277
Entrez Gene ID:54102
Ensembl ID:ENSG00000159212

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 36089936 - 36090503

NM_053277 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
113743604168736043060
137514843607957736079686
148516103608024136080366
161117173608099736081103
171818993608165436081835
190038003608861836090518

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4816168IncompleteBC040196chloride intracellular channel 6
9093278IncompleteBC169220chloride intracellular channel 6

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_053277 NP_444507    

Related Sequences

 
mRNAGenPeptSwissProt
BC040196 AAH40196 Q96NY7
AF426169 AAL24813 Q96NY7
AF448438 AAN76729 Q96NY7
AF448439 AAN76730 Q96NY7
AK092733 BAC03959 Q96NY7
AK289663 BAF82352 Q96NY7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLIC6 NP_444507 M.musculus Clic6 209195 Gene Info NP_766057 65
R.norvegicus Clic6 304081   NP_788267 65
A.thaliana DHAR3 831532   NP_568336 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)